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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|157762416
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.54
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLNPMYMKHR ASTPNPQVSC QPSTSSFQRH HRPSSPGISL GPPSSPPSLY NLQQIASATA  60
   61 VDQQNNNDVE ELSAERLNLY LDKQEGEIEN LDEEIDESTE KKWWLRTKRW FRLALPHFGL 120
  121 VLLSIGYTLI GAFCFHHYEK PYEQQLRNET SLRIGALKNR VMDQLWRMSN NGTAYSTWRQ 180
  181 TANDGMDELI RDVFWDYTRN YMTPDDVIYG DGPIKWSFMS SIFFSWTAIT TIGYGHIVPR 240
  241 TDEGRVAIIF YALLGIPLIL VTIADIGRFL ATYIIKLHHG YMAVMSFITN SCLKCIKWAC 300
  301 CWIRLPRRHI PMPTLELLQR TQKLYPNNNP TVAATAASAG GGTGRKKKQQ RDNVSDAGTF 360
  361 DNISEINDGS EGGENENEGE EEEQVQFDPS NHEKRVSVLF ILLIMLGYVA GGAYMVRWWE 420
  421 EWTFFEAFYF CFVTVTTIGF GDIVPANVDW LPATLAYIVF GLIITTMCID LVGSEYIRDI 480
  481 HFYGRSLGRQ FMTIGGKVVH LGEVFGYVAF LQKNYGLTAE QLTKLSQLPE EYLLDCLING 540
  541 RQPDLNWIGG RPYVPPDIYY FKWIEHPRTL SFASDRVLQS MESLDLNTSR CSTARTLTPR 600
  601 EYYQKILFQY CKQLQPEEPI ADIDN

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle