YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|157762568
Protein type:	Globular with Signal Peptide
Type Confidence:	0.39
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPSVAIAGAG LVGALNACFF AQKGWDVSVY EFRKDIRTMK HVQGRSINLA LSQRGKSALE  60
   61 AVGLKEYIVN QGVPLYARLV HNKDGKTYSR QPYGKPGEHI VSINRRHLNE VMITQAEKSP 120
  121 NVKFFFEHKV KSVDYDKKQL VVQCTSQPSR IPTFGTKSPP AEHEEFHVEA DLIIACDGAY 180
  181 SAVRRSLMTI PRFDFSQEYI EHGYVELNIM ANNNEFAFEE NVFHLWPRGH FTLIALANRD 240
  241 KTFTVTIFAP FTEFEKHMST TEEVLSFFEE NFPDAYLLLG KEHIADTFNR VKPQSLVSIK 300
  301 CSPHSFFNNL VLMGDAAHAM VPFYGQGMNC GFEDCLVFSE TLEEQNNDIA SAVQVYSERR 360
  361 VNDAHTINDL AMYNYEELKD LVNKNSYKLR KKFDGFMNAI FPKSWIPLYS MVTFTRIPYS 420
  421 EVVDRRRKQD RILSNLWKTT STLALIGAAI GIYSNRGRLG L

Type	Start	End	Confidence
Signal Peptide	1	21	0.89
N-region	1	12
H-region	13	18
C-region	19	21
Cleavage Site	21	22
Non-Cytoplasmic	22	461	0.93