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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|157762582
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIIRKAAFFL VLATIVFASD DPKDSENAKS SIRFTPKLIS SYREKVRRMF YHAYDGYLNH  60
   61 AFPLDELKPI TCVGQDTWGS FSLSLIDALD TLLVMGNNTE FRRAVTLVLE KVRDDANVNV 120
  121 SVFETNIRVV GGLISAHMLA GRHKDLVKEW KGYPCDGPLL KLAVKMADRL MPAFNTDTGM 180
  181 PYGTVNLKYG VHKDETPITC TAGVGTFIIE FGTLSRLTGD DKYEKVALKA LDALWSTISP 240
  241 IGLVGNHINV QTGQWTATDS GIGAGVDSYL EYLAKGSYLF RRPSLMKQFH EHATSINKHV 300
  301 RKGDWFMWVS MAKGAVSLPI FQSLEAFWPG TLTMVGDVQD ASRIMLQYSE IIRKYGFPPE 360
  361 FYNIHNEEPV DKRSAFPLRP EMVESLMYLY RATKDETWLE LGAEIVDAIE SSARTKCGYA 420
  421 TINNVKEHNI EDRMESFFLA ETTKYLYLLF DPENFIHSKG DQARIFKSSK NLTCILYGGG 480
  481 YIFNTEAHPV DPGMLDCCSI QAKREQEVGE KEVSTGDHLE KRNLTEKGGE KYYENQYGKK 540
  541 EELIQYEVDE KMKAEAEKKK AEEKSQQAMD KVRTFLMRAY LKDEAKQRNG ESSDSAKQLL 600
  601 DQLLKAYPNH TQELENVNKE ALYLFEEQQH LNDIRDIVKD IPIPDLFCNG CSYPLHEIVD 660
  661 SVALRVMMAD IYEYHIYPNR KVKFHHGPVC WLEETPRIED DYKNEPPSVH TDKWNSALFD 720
  721 SDMVVLSNFL GDDDIEEIRK FGFKYLLAPG YKNIDRRIGG QNIALKRKKA WYYEV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle