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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|39592068, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.77
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIFKKLQALK PFTKVLLVGT GTGAGYTAHT VDSPEDLRQL GIFRFGRAAK TVGKIVVDYK  60
   61 TSLRGLPAPS EGYDDAIQKC HQRSAERLLE LACANGGVFI KVGQHISGME YLIPPEYTQT 120
  121 LSVLTSQAPQ ASKEDVVYVV ETELNAKVDD IFSEFSDKPV GAASLAQVHI AKLKTTGETV 180
  181 AVKVQHKRVY KNSRTDVNTM ELLVSVADAV FPEFRLMWLV DEIKKNLPNE LDFLHEAKNA 240
  241 DEAARRFKHL KFLRIPKINY DLTTKRVLTM EFCEGAHVDD VEYLKKHKID PHDVCVKIGR 300
  301 TISEMIFLQG YLHSDPHPGN VLINSKGNGN YEIIFLDHGL YLNISDHIRR LYSDLWLAIL 360
  361 KPDLQEIRKV ASQMGVGELY GLFACMVTRR SWKSVTGGIG KSKMNESEKD ELRMYASSLI 420
  421 PQISEVLARM PREMLLILKT NDLMRNIEHK LGVFGSSDCH LEMSRCVIRS SHQLAIRRTD 480
  481 SRLQKLRIGF KMYWSLFKIF VYQYYLRFVN SSSL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle