YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|157775835
Protein type:	Globular with Signal Peptide
Type Confidence:	0.98
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MANWPRVSPI AYVALGVLLG LTLSIVSQSG NSAYDAASRI AIIRANRNDP QLEEHDHAHG  60
   61 NDPHGDEEVD DHHANFAPVQ FHSNDSSHSH DGESVIADEV AKKVRVFCWI LTGKQNHEKR 120
  121 AKHVKATWAK RCNKYVFMSS EEDAELPAIN LNVSEGRDYL WAKTKGAFKY IYDHHLNDFD 180
  181 WFLKADDDTY VVMENLRFML LAHSPDEPIH FGCKFKPFTQ GGYHSGGAGY VLSREALKKF 240
  241 IEVALPDKSL CSQNHGGAED AEMGKCLEKV GVKAGDSRDA DGHHRFMPFV PEHHLSPGHV 300
  301 DPKFWFWQYT YYPMDQGPTC CSDYAVSFHY VSPNLMYVLE YLIYHLKPFG IDRAIRVPKN 360
  361 DTIIHTAYSI SRSERGQDDA FRERPELPV

Type	Start	End	Confidence
Signal Peptide	1	32	0.93
N-region	1	23
H-region	24	29
C-region	30	32
Cleavage Site	32	33
Non-Cytoplasmic	33	389	0.99