YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|39591835, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.53
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVAGVRLLAY GRLAVRAVFS ASALDLGAAV GPEAISTGRR GLSSSSSKPA KPSNEGSSSP  60
   61 ASSAHVENVI ASCAGFPKDM LNGPSTVLDK GVYGDDAWFI SRFKNTFVVG VADGVGGWRK 120
  121 YGIDPSAFSR RLMKECEKRV QGGEFDPKRP DSLLDFAFRA SAEAPRPVGS STACVLVVHQ 180
  181 EKLYSANLGD SGFMVVRNGK VISKSREQVH YFNAPFQLTL PPEGYQGFIG DRADMADKEE 240
  241 MDVKKGDIIL LATDGVWDNL SENQVLDQLK ALNEGKGNVQ EVCNALALTA RRLAFDSKHN 300
  301 SPFAMKAREH GFLAPGGKPD DITLVLLLIA

Type	Start	End	Confidence
Signal Peptide	1	23	0.51
N-region	1	14
H-region	15	20
C-region	21	23
Cleavage Site	23	24
Non-Cytoplasmic	24	330	0.98