YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|157775333
Protein type:	Transmembrane
Type Confidence:	0.76
Topology Confidence:	0.64
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEKNRRKKDD AGVMTKTLAG VAALTFLVSF ICSSYDITFS HVISTIDVIL EESEYYRSTK  60
   61 EWMASSIDAT WHEVSIPSRK AEHLQAINPE VDVAAGGKHV FTPEQLHFFD GSRDSKPCYL 120
  121 AILGRVYDVD GKKEYYGPGK SYHHFAGRDA TRAFTTGDFT ENGLVASTHG LSHDELLSIR 180
  181 DWVSFYDKEY PLVGVVADLY YDSDGQPTAE LTDVLARVEK ANEYRKAQAV EIEVFPPCNS 240
  241 EYNQNGGRVW CSTKSGGVER QWAGVPRKLI EQTTKKFRCA CVKNFGPGVS GAEEVKTSSN 300
  301 RGDLDHPDLE LFPDCSPTSN SCKIVS

Type	Start	End	Confidence
Cytoplasmic	1	12	0.74
Transmembrane Helix	13	35	0.64
Non-Cytoplasmic	36	326	0.99