YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|187025122, gi...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.91
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTDTADQDFE LVDGAERKSS TSDSFEAVDD KKTDSQSVSE DEVDQTLQDV DKETEEEEEP  60
   61 KLPFVDQSIK DDAERKPEKD GEQLVEEALN APIRPDQEQF YTAESSNRAI TLLIAFSAMM 120
  121 FTVPLLVMAT LYYNVFIDHF HLPPAEAMLY SGICAAVVVI LIAAAFCYVA WKEEKDAEDK 180
  181 LKAEKKKE

Type	Start	End	Confidence
Cytoplasmic	1	109	0.99
Transmembrane Helix	110	132	0.91
Non-Cytoplasmic	133	147	0.89
Transmembrane Helix	148	171	0.93
Cytoplasmic	172	188	0.99