YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|187025092, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.70
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLSRLSSPQL CSRIVVVTRG VASAGQVTAH SSDNSIGFFE KISYRFKGVP LPTETEAPKS  60
   61 MFDACNKEWS APELLPAVPK DFKEHPDRDL TNYPYPSRPM YPPKTRLLMM PDSWFTAFQK 120
  121 VTGTSGPYLF FGGLFAFLVN KELWVFEEQG HMTVGWILFY LLVSRTAGYK IDAGLYKDYQ 180
  181 DRVGFFKGLI QEDLKEAVEF RKTSAQQTES LNALKESLPT SFKESMQLQL EAAYRKNVQN 240
  241 ISGEIKRRID YLKETEETKA RFERDQLLKL INESVEKQVS QKDFQEKFLQ NAIQQLKGIA 300
  301 V

Type	Start	End	Confidence
Signal Peptide	1	24	0.71
N-region	1	15
H-region	16	21
C-region	22	24
Cleavage Site	24	25
Non-Cytoplasmic	25	301	0.85