YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|39591530, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.48
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLLPRLDEVR RAWTAFHFFN TLLALAFPVI RSTFLCDFVF ATEGNEQCEI DSREREILMF  60
   61 LLIILAWKGR KATNWMHYVN NIFLFSKIAG MFLFIRADIL AGIIYILACL IITVVFPEPV 120
  121 YNGPEQVTYF QGEQLYEELT KNRNTIWIIQ FFTTWSPECR HVSPVFAELS QKFTLPNMKF 180
  181 GKLDIGRWAK EGERFRVNAH PMSRQLPTIC VFIDAKEISR RPLVNDSRRA IPFVFSEENC 240
  241 ILAFDLVNLL NEQKQKKVGK TSKQD

Type	Start	End	Confidence
Cytoplasmic	1	12	0.89
Transmembrane Helix	13	35	0.80
Non-Cytoplasmic	36	76	0.75
Transmembrane Helix	77	95	0.48
Cytoplasmic	96	96	0.30
Transmembrane Helix	97	121	0.73
Non-Cytoplasmic	122	265	0.59