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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|38570069, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFSFVDILLA LLLNATVLLA RGQGEDDRTG GSCTLDGQVY NDRDVWKPEP CQICVCDSGT  60
   61 VMCDEVICED TSDCPNPVIA HDECCPVCPD DDFQEPSVEG PRGSPGDKGE RGPANPPGND 120
  121 GIHEQSVLPV PTSHSGPAAL GGNLSPQMSG GFDEKSSPMA VPGPMGPMGP RGAPGPPGPS 180
  181 GPQGFTGPPG EPGEAGAPGP MGPRGAAGPP GKNGEDGESG KPGRPGERGP PGPQGARGFP 240
  241 GTPGLPGIKG HRGFSGLDGA KGDAGPAGPK GEPGAPGENG TPGAMGPRGL PGERGRAGPP 300
  301 GAAGARGNDG AAGAAGPPGP TGPAGPPGFP GGPGSKGEVG PQGSRGAEGP QGARGEAGNP 360
  361 GPAGPAGPAG NNGADGAPGA KGAPGAPGIA GAPGFPGPRG PPGAAGAAGA PGPKGNTGEA 420
  421 GAPGAKGEAG AKGEAGAQGV QGPPGPPGEE GKRGPRGEPG AGGARGPTGE RGAPGARGFP 480
  481 GADGAAGPRG APGERGGPGV VGPKGATGEP GRNGEPGMPG SKGMTGSPGS PGPDGKTGPG 540
  541 GAPGQDGRPG PPGPVGARGQ PGVMGFPGPK GAAGEAGKPG ERGVMGAIGA TGAPGKDGDV 600
  601 GAPGAPGPAG PAGERGEQGA AGPPGFQGLP GPQGATGEPG KSGEQGAPGE AGAPGPSGSR 660
  661 GDRGFPGERG APGPAGPVGA RGSPGSAGND GAKGESGAAG APGAQGPPGL QGMPGERGAA 720
  721 GLPGLKGDRG DQGAKGADGA AGKDGIRGMT GPIGPPGPAG APGDKGESGA QGLVGPTGAR 780
  781 GPPGERGETG APGPAGFAGP PGADGLPGAK GEPGDNGAKG DAGAPGPAGA TGAPGPQGPV 840
  841 GATGPKGARG AAGPPGATGF PGAAGRVGPP GPSGNSGPPG PPGPAGKEGQ KGNRGETGPA 900
  901 GRTGEVGAAG PPGAPGEKGN PGAEGATGPA GIPGPQGIGG QRGIVGLPGQ RGERGFPGLP 960
  961 GPSGEIGKQG PSGPSGERGP PGPMGPPGLA GPPGEPGREG TPGNEGSAGR DGAAGPKGDR1020
 1021 GETGPSGTPG APGPPGAAGP IGPAGKTGDR GETGPAGVPG PAGPSGPRGP SGPAGARGDK1080
 1081 GETGEAGERG MKGHRGFTGM PGPPGPPGPS GESGPAGASG PAGPRGPAGS AGSAGKDGMS1140
 1141 GLPGPIGPPG PRGRNGEIGP AGPPGPPGPP GAPGPSGGGF DIGFIAQPQE KAPDPFRHFR1200
 1201 ADDANVMRDR DLEVDTTLKS LSQQIESIIS PDGTKKNPAR TCRDLKMCHP DWKSGEYWID1260
 1261 PDQGCNQDAI KVYCNMETGE TCVNPTESAI PKKNWYTSKN IKEKKHVWFG EAMTDGFQFE1320
 1321 YGSEGSKPED VNIQLTFLRL MSTEASQNIT YHCKNSIAYM DQASGNLKKA LLLQGSNEIE1380
 1381 IRAEGNSRFT YSVTEDGCTS HTGAWGKTVI DYKTTKTSRL PIIDIAPMDV GAPNQEFGIE1440
 1441 VGPVCFL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle