YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|187022963, gi...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.85
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSPNPFLRED VEDWNTFYLG LCVLFGWMIF VLICARPQLF RDYLKKWFKP DGDICTEKIR  60
   61 KAEARLQETL RLAQKPSNFL VDQAAVMSAM TIRPEKTETR ITLGLVEEED EEECS

Type	Start	End	Confidence
Non-Cytoplasmic	1	15	0.85
Transmembrane Helix	16	39	0.87
Cytoplasmic	40	115	0.87