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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: UNC58_CAEBR
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.67
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFFYSPNVAS SSSASHRRGT LTHQHHLHVG HLDTRLSVQI PEILSRNFGH HDPERARLVP  60
   61 EHLRFLVDEN QELWTGGNQP PVGILELCAA SPVDSVFSTN DARRHNHVTA RWEGANINSQ 120
  121 SALLDADDGA TVITDTIKDD QEDKEPKSCP QQTVKYIKIL LPHVILVSVL IGYLCLGAWI 180
  181 LMLLETRTEL LSRSKKLVRL TNLMSNFTAE SWRMLSDAQH GSITMDEGEW AATFREWMVR 240
  241 VSETVDDRRP IRRELNRPDD LSNMHNKWTF PTALLYVLTV LTTCGYGEVS VDTDVGKVFS 300
  301 VAFALVGIPL MFITAADIGK FLSETLLKFV SFWNRSVRKV KQWMSRVRHG RRKSLQSTGG 360
  361 QNDTLDILGV DGTEEKLWFP IGAYVSCICL YCSMGSAMFI NWERTWSFIH AFHFGFNLIV 420
  421 TVGLGDIVVT DYIFLSLIVA FVIVGLSVVT MCVDLASTHL KAYFTRIHYF GRAKRFLGMS 480
  481 EELKEIVALL GAMRRKKGGK VTWNDVRDFL DNELRDRPFE PHELLMKLRF IDETSSGMST 540
  541 IRHNSFQSDF FRESEYIRRV AALRPEQPAY L

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle