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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|39590982, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASQACLKAF IVLIGLVSLA RSAYIANDVV SDYAEVKELL AAFYRKHAKK YGHDYDPVAI  60
   61 QAIAENMDKA VKDDKTEATV NRKLWNEVFE NDIILTLPQA EALLTESNTP RPKRQAHPDR 120
  121 RNFWPNLTIS YEFYGGEENW RQLIRSAIRH VEQNVCFRFK ENGGDRDGLR YYRGNGCWSN 180
  181 VGRVGGRQLV SIGYGCDSLG IVSHETLHAL GLWHEQSRDD RDNYISIVAD KITRGTEGNF 240
  241 AKRTPANSDN LGQPYDLGSV MHYGAKAFSY DWSSDTIKTR DWRYQNTIGQ RDGLSFKDAK 300
  301 MINTRYCSNI CQRTIPCLNE GYTDPNNCSK CRCPAGYGGT YCETVEYTAC GGSLTASSSY 360
  361 QKIESGIVQA DANCVWRIRN PGGNVEVVFD KVNFQCSDPC QSYVEVKYLS QKTSTGARLC 420
  421 CSLPSVIRSE GDDVIIIYRG TPNTAYGWKG FTLRYRALGG TPITSVATAR PTAATTTRPY 480
  481 WTRTASGWIH IQHPPLYTPN GNIYTSDEQS RELTDTSTEE FYDPSTLSSS PSASPAQLLL 540
  541 PADVVSSSER PPFAPQEHDL SQLSQNNALT RPTPTTTVYP GSASWSNWGE WSACSQPCGG 600
  601 CGTRTRVRAC YGGNQVCVGS NLDRQSCNTQ VCAKPKKGMI CNGRLLLPCD LLAKLNFGSN 660
  661 NYLNPKLKQS GFARSSTLPL PRISQRKPVL RHERFIYQCP TALLTIQMEY KEPAQGANDA 720
  721 YFQQYPECCS GYTPRRGVCY KN

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle