YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|157774627
Protein type: Globular with Signal Peptide
Type Confidence: 0.95
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMLASSAPTA PSLLPPNSQP SAATSARGTT DDCSSSTSPT NTSASDGSSM DILSNLMSTV  60
   61 TNQVPGNSLV KQESPPITTS PIFNPDLAFL QISQLFQAQQ AMVQYHNQQQ KQQQHQIIQQ 120
  121 QQLQQQQQQN QQIQSQSQSQ NQSSSSSSDR KRSYPCTFQF CVICQKDVHS SKLPCHIRQC 180
  181 HVAKPMFQCP ACDFTSTYSK NNVKSHMVSL HGMAGDPISY MDQYAGQVEE FMKLCFPNVR 240
  241 GRGRPMQGRS SPPKSPTSPP HGGRRGSVAS TIPSRRHTVS QSELLATIQA QQQQQAAFQS 300
  301 LRNFRFNPLQ SIFPTVLAAN NNNNSVLSAN KHAVNNFMIK PEEKDVPTMP IEDIKNIITS 360
  361 TTSPTPSVVS FGGGIIQPIK PGENAQPKYL STGFDWPVLN DLQMKGTIFN DCRINMELYA 420
  421 ENIARKIEAN EVYSTFIMSD DMRVTVEEVR SRVSVQLFEV MFAIHRMDVK CLDLNLVNLL 480
  481 IEISPTNSDA QLLRKMESSK MDPNEEFLLG LTKIDHIEEK LETMKHVHMF PEQMETLKDT 540
  541 IIKFEVAVKV LCESRALRNV MQLVLAILNI GFFDDRQCLS INGFPVSHIM QIIQSNTPSG 600
  601 QSVQSILVTI LKDEINLDLD ELFGIIDVLE KIEDEDYNGI VEELTVLDDK TVRAEKEMEH 660
  661 SGSNISLSEF VENSKNLSKA TWDSLNSLKT NIQKLTAYLG NPLPRHQNLN PHEPFNSVLH 720
  721 LLRSLKTAIE LNETSEEQHI NVMSP

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle