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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|157759602
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.93
Topology Confidence: 0.64
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRVCVVGAGA SGLPAVKACL EEGLDVVCFE KTADIGGLWN YRPGQKDIGG TVMESTVVNT  60
   61 SKEMMAYSDF PPPADYANFM HHSKVIEYIK SYAEKFDLMK HIRFSTPVNR ISRNEEGKYI 120
  121 VSLQSGKVEE FDKLMLCTGH HAQPSYPELK NLDKFKGEVV HAYNYTNTKG YEGKDVFLLG 180
  181 IGNSALDIAV DIAKIAKSVT ISTRRGTWIF NRVSQGGMPY DVQLFSRYYD ILLKKLPHTI 240
  241 ANDFMEHRLQ QRMDHDLYGL RPDHRFFQQH PTVNDALANL LCAGYITITE DIDTFTEDSV 300
  301 IVKGGREFKC DIFLTCTGYT FGFPFVDSDI VEIKNQQVPL YKYVFPPNSD SVAVIGLIQP 360
  361 IGSIAPIAEI QSRWAARVFS GKCEMPSSQE QVNDIQKKKT AMKRRYFDSI KHTIQVDYMT 420
  421 YMDEIAEVIG CLPPMNQYLF QYPRFWMKLF MGANVPYVYR LVGPNSWDGA EQAIWTVPDR 480
  481 VKKPLKNRQC RTRKHKKRGT TDEYFRYATQ KVIATNISIL FCSGLLLFCS TTSTLPPVVY 540
  541 FLSFFLFFTL YGATLMWFDL QYDMTTIF

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle