YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|157750450
Protein type:	Globular with Signal Peptide
Type Confidence:	0.84
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MCSKFSRTFF LLLTILVCTL MIFSMAPRMT MSFWRTREAR VLWRRPETEH LDCGRILEND  60
   61 KSYIENFVGD NRIPLVSNLK YMDMSCEAIQ NRIIPFNFRL RPLKLGVVFA RVVYKDYEFL 120
  121 EKQVQMSYHP QNVFCFFIDS KKELPIDSAG HNMNLAHYKC MEKMIKLANW DYFVLMQNHD 180
  181 VIGKTVYEIS RIFEILDGAN DIDIDKEFGR VEERFEWDLK KLRLFRDESS LSSGFLNHTL 240
  241 RLSKGSVQGS LSREAVEWMV KTVNPKKYLD QWNEGSYGVD EQWISTFQAN EFLKMPGHFT 300
  301 DKCLVETGNK IDFITRWSKW SWSDEIGEKC GSKYVRHGVC IMGIEELPVI AQMPNIMFNK 360
  361 MMPMFDYAIV ECTAELLYNR TFLGQDDHPL EEEYYENMIN VHYHKHHMEP DYVLNCTPGY 420
  421 EIWRSRKYPL

Type	Start	End	Confidence
Signal Peptide	1	26	0.83
N-region	1	17
H-region	18	23
C-region	24	26
Cleavage Site	26	27
Non-Cytoplasmic	27	430	0.99