YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	SODC_CAEBR
Protein type:	Globular with Signal Peptide
Type Confidence:	0.70
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFMNLLSQVS NAIFPQVEAA QKMSNRAVAV LRGDVVSGTI WITQNSESDP AVIEGEIKGL  60
   61 TPGLHGFHVH QYGDSTNGCL SAGPHFNPFG KTHGGPNSET RHVGDLGNVE AGADGVAKVH 120
  121 ITDKLITLYG ANTVIGRSMV VHAGQDDLGQ GVGDKAEESA KTGNAGARAA CGVIALAAPQ 180
  181

Type	Start	End	Confidence
Signal Peptide	1	19	0.70
N-region	1	10
H-region	11	16
C-region	17	19
Cleavage Site	19	20
Non-Cytoplasmic	20	180	0.99