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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|157750356
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.96
Topology Confidence: 0.78
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRLWQWLLTF ATFVLLITTE ARLRRHRKRR FVSSHFDELY CGESAHAQSQ FEEERESNSS  60
   61 KVSSVHSTQF NWGLDNTICI KLQNVVHVLK YERLEQRYPI ESSYTFSVPL IDTNCKCHCY 120
  121 GFGSNDVCNV EKYADDRNCT TNSEFPTCYT KYHPAVEPLD CPVTSIPAKA CCDIKLKPRD 180
  181 GRMFRAVKLQ QPINDMIITH SIFANNSGKI MKVLGPEEYR INLIKGKEQF ELTEYHRISV 240
  241 QLVASSPQQQ LREGMYYFPE ENHNDLREGK INEITENDLD KLGWYRRIGN DWQVATSGLL 300
  301 LRNAHKVVIK NCKGQLHMDQ FSGTKNFVLR GTQYNDTFNE RKVSENNFVR SVKVDESSRE 360
  361 ITIIHEHGTA AQVSLKTDTR PNLTKSQSLL ANFTGSITLD HDGNRMLNVT FFGVKGTVHI 420
  421 RMYVNDKKLV ATFACTAQFG TSVKDDGSRI SLPSSINQAQ WVCILPDEQP VKSEICKWIP 480
  481 YEEKAIRSPR QEQSWSKGHS PCSQAECNGL KSGVSDLFPW IINFDYFMAH GGDLTEWLKM 540
  541 GIHIVIAVGL LFLLIILFTK CLVPLACCSL SIPFKNRNKK KKKKNSSDY

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle