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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|187035579, gi...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.50
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVDQIVFKGN MSNRNGPGNS HFLEEIDEED DGGVKPPNEE PSVSTESKEP MKPAPEDKKA  60
   61 APEEKKKYRV HPTMQNLPLA RSNSSTSLSK AEAVEKYYER NAHTVSGIHK NQDTFGQLQK 120
  121 RYKPKQDAVS VLSSPGALGE TVLPTPRHFD RSMYWFAFHR KQIGLRHIIV ALMVLSYTIF 180
  181 GAFMFWSVES RYERAITLER MTNLEELLGK ISENITEIVN DPKTNTTESE MKAYIRDAYL 240
  241 TLMKLEGQYK GSTYYKLEDH GRNWKWTFES AFFFSMNVYT TTGYGSIAPE STLGQLLVCI 300
  301 YGFIFVPVTL VALRDLGQFF LVHLTKLYAQ LIQRMRELNG DRTLDVNEII KIPIKACLLL 360
  361 LALYLAFCTI FIHFFDEFSG QESGTGMSLF LCFYFSFISL STIGLGDIMP NNATFSPIIS 420
  421 IMFFFGMALT KVVNRNTFIA VENGIFGALT LVENKLDGIV RRGKVMPEEK EKKPTKQPSA 480
  481 PHPPHIQRAL SVEDYVAAQR ENTNDVLNNF TVRSIATFMK SNTDIYGGGF GRVQLRRGDL 540
  541 MGSDHQMTTT SIDNKPPNQQ DSAV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle