YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|187035467, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.98
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDRRFTENLC SSKVAFALIA SLALASALPD LGSIIGGGEN GGIGGVVGGS DGGLGGIIGG  60
   61 GNGEGIGGIV GDLLGGNQDV LQNLLSVLGG NPGGLGLPIP GNITEIPSFL TDILGDLPEE 120
  121 TIQKITDLLG EDLPISELLS RLDALLPEGV LEVSQKSDLF FDKCEIQQLL ATVAELVSKL 180
  181 LAAISKVLNN LQPVFDQLSD ILNNKNQKLE QQAQAIDALK QKFPVEIDTI FYIASQVEKT 240
  241 LQGGNGGVVP ELPEVPSVPE TPQIPF

Type	Start	End	Confidence
Signal Peptide	1	29	0.95
N-region	1	20
H-region	21	26
C-region	27	29
Cleavage Site	29	30
Non-Cytoplasmic	30	266	0.99