YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|157765146
Protein type:	Transmembrane
Type Confidence:	0.98
Topology Confidence:	0.67
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMDVEVEESS WFLPTVLIAA VSFIALYFTR RFFKGGQFTE RVSAKGLVAV VTGANCGIGY  60
   61 ETVRELNLKK ADIYMLCRSE EKANDAKRAL VRQGCDATRL HFIECDLTDF ESVRRAAKET 120
  121 LKLTDTIDIL VNNAGIMFQS KHELTKDGHE KTWQSNYLGP FLLTELLLPA VKKSQYARIV 180
  181 NVSSLMHMRS GKINIATVDD KKSFGMMKSY SQSKLANVMH ARALTKELRK DGAEHVTANS 240
  241 VHPGGVDTEL TRTTILAWPV IKQISAPFRW FFLKTSRDGA QTSLYVALGK KLGGISGKYF 300
  301 ADCKLTKENP LALDDQACQD LYNYSLEATG LAK

Type	Start	End	Confidence
Cytoplasmic	1	9	0.67
Transmembrane Helix	10	29	0.93
Non-Cytoplasmic	30	333	0.78