YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|157746465
Protein type:	Globular with Signal Peptide
Type Confidence:	0.90
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGVLPKINFA VRQLRKCSMT ATSSVSSSDP SLASSAFVQD HVRQMQNDIM EQLIPQDASG  60
   61 AVENLADLNV TSNLGRMTHY YFQQGGKMLR PTVSLLMGNA CNSAMNRSIP EEQIAIPISE 120
  121 RSAISSHLIV CQNQYKIGMI AEMIHTASLV HDDVIDEANT RRGSASVNAV WGNKMSVLVG 180
  181 DFILARATQI LCSIGKPNVI AVMASIIEDL VLGEFMQMSV TPSEATPSQR MVAYIEKTHR 240
  241 KTASLFASSC RSTAILADSS NSNLHQTAYE YGRNLGIAFQ LADDLLDFIA TSDEMGKPVA 300
  301 ADLKLGLATA PVLYACEQYP ELTTMLLRKF KHEGDAERAR DIVMNSDGMD KTRQLIDAYS 360
  361 QKAVEMASSL PNRNESTEQL IKLALSQTDR KF

Type	Start	End	Confidence
Signal Peptide	1	35	0.88
N-region	1	26
H-region	27	32
C-region	33	35
Cleavage Site	35	36
Non-Cytoplasmic	36	392	0.99