YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|157761921
Protein type:	Globular with Signal Peptide
Type Confidence:	0.96
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRPIVLLLFP IFSLSIPLGK QTGYDDAEAR RLVKLAAAAY GDKHATCINK AFPNGENFHI  60
   61 ENMEQKSCDH LDSTCAAYAV VSEHAKRIIV VFRGTKSKSQ LFLEGWQSVH QGIDFFDMGD 120
  121 VNRYFLNAHL VLWPEIEKVI TNPRWVDYEI TFTGHSLGGA LAALAAARTA KQGYRPGSMI 180
  181 KTYTFGQPRV GTRLFARNFD ALLPNTYRVV FRRDIVPHMP ACHKNQTFIS EHEGGAKPCH 240
  241 ADHLDYYHHG TEIWYPDEMS PGAHYVECLG APKNEDFACS DRIKFFIDQS ESYTWDHRHY 300
  301 FAVKVPPYGK TGCDDTMPEG KPSVFENVVK RLNVLTRTFG LD

Type	Start	End	Confidence
Signal Peptide	1	19	0.95
N-region	1	10
H-region	11	16
C-region	17	19
Cleavage Site	19	20
Non-Cytoplasmic	20	342	0.99