YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|157745195
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.92
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDVSQLTDAE LRDNLRSHGV SVGPIVASTR KVYEKKLLKL AGNQSSRHND PSQVNGHIDQ  60
   61 NEKDRSFSPM FAAVTADTPS KRTTRHSGAA VTTQQPSGSP ARRPDSDTDD DCEESMRYLT 120
  121 EEEMAADRAA LRAAQLDNRK SSAFGMKQLL TILLVVMAGT FIYFLIQNGV ADFIDPSYFT 180
  181 LSNKTDDDPI

Type	Start	End	Confidence
Cytoplasmic	1	148	0.97
Transmembrane Helix	149	167	0.95
Non-Cytoplasmic	168	190	0.92