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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|39589314, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.59
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTPESEPSSS NAYYNTFPPG TDEENLPPEY GPFDEVEPLI EPEKPMKIRT LVTAVGLTVL  60
   61 VFTLLISTVA FASLYFHLLM QNTSRLPRWP GPSISPLGKY SKAAVAADNE ICSEIGRNIL 120
  121 LRAIASLFCI GVMDTHSSGL GGGHFMTIYN ATTKECTVID AREIAPLAAT EEMYRNKWNE 180
  181 SRIGWKAIAV PGELHGLWTE FEKFGSGKIE WRHLLKPTID LLNEGYPTSH ALAKALNQNS 240
  241 AQIHSEPTMK NFINPETGAV FQPGEQIKTR KNLLETLKFL ANSTNPIRDF YEGAIAEKLV 300
  301 KEFEQNGGIL KAEDFKNYRS IVHDSKNVIY TKLKNGRGVC GPPPPSGSAV AQAILNIMDG 360
  361 FEYNLKSFTD IATLYHHFLE SSKFSYAARS WLGDPNFVSN ATEIARNITS KEWADWVRSK 420
  421 ITEVTHPDDY YGGSFEAPPQ DHGTTHVSII DAQGNAVSVT STINLYLGAL VSSESTGILW 480
  481 NNEMDDFSTP GHPNFFGFPP SPANFIRPGK RPMSSQSPLV IFNTNGQELM AVGGAGGSTI 540
  541 ISGVAGVALH ALWLKADVKQ AVDAPRMHNQ LQPNYTWYEP NFPKAYVKSL IDRGHTMKAV 600
  601 NNLTVVTAAE RLADGQIYAN SDFRKGEESA PAGY

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle