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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: RBOHB_ARATH
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.46
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MREEEMESSS EGETNKISRC KATGSDNPDE DYVEITLEVR DETINTMKAK ATLRSVLSGR  60
   61 LKTMVKSLSF ASRRLDRSKS FGAMFALRGL RFIAKNDAVG RGWDEVAMRF DKLAVEGKLP 120
  121 KSKFGHCIGM VESSEFVNEL FEALVRRRGT TSSSITKTEL FEFWEQITGN SFDDRLQIFF 180
  181 DMVDKNLDGR ITGDEVKEII ALSASANKLS KIKENVDEYA ALIMEELDRD NLGYIELHNL 240
  241 ETLLLQVPSQ SNNSPSSANK RALNKMLSQK LIPTKDRNPV KRFAMNISYF FLENWKRIWV 300
  301 LTLWISICIT LFTWKFLQYK RKTVFEVMGY CVTVAKGSAE TLKFNMALIL LPVCRNTITW 360
  361 LRTKSKLIGS VVPFDDNINF HKVVAFGIAV GIGLHAISHL ACDFPRLLHA KNVEFEPMKK 420
  421 FFGDERPENY GWFMKGTDGW TGVTMVVLML VAYVLAQSWF RRNRANLPKS LKRLTGFNAF 480
  481 WYSHHLFVIV YVLLIVHGYF VYLSKEWYHK TTWMYLAVPV LLYAFERLIR AFRPGAKAVK 540
  541 VLKVAVYPGN VLSLYMSKPK GFKYTSGQYI YINCSDVSPL QWHPFSITSA SGDDYLSVHI 600
  601 RTLGDWTSQL KSLYSKVCQL PSTSQSGLFI ADIGQANNIT RFPRLLIDGP YGAPAQDYRN 660
  661 YDVLLLVGLG IGATPLISII RDVLNNIKNQ NSIERGTNQH IKNYVATKRA YFYWVTREQG 720
  721 SLEWFSEVMN EVAEYDSEGM IELHNYCTSV YEEGDARSAL ITMLQSLHHA KSGIDIVSGT 780
  781 RVRTHFARPN WRSVFKHVAV NHVNQRVGVF YCGNTCIIGE LKRLAQDFSR KTTTKFEFHK 840
  841 ENF

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle