YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|60730011, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.59
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MISSRIFEKW WLRAFVALVI FFIWQICYAI NKVQGLEEEK TVLQATIEVL KRKSDMLRTE  60
   61 IHEKERTLTR LDGRIEEIDT QIRDHISLLP RVNRSTPFIY FVTPTHFRAA QKADLTRLSY 120
  121 TLSHVPNLHW IVVEDSDSLT SSVAEILKRS RLPYTHLNAR TPSAQKMKYT DPNWTLPRGV 180
  181 EQRNAALLWI QNQLSGVGSG VVYFGDDDNT YDLKIFEEMR KVDNAGVWPV GIVGGMFVET 240
  241 PVLADNGSII SFNSIWKPDR PFPIDMAAFA VNVTLILSHP NALFSFDVPR GYQESTFLEN 300
  301 LGIDRLNMEP LAEKCTKVYV WHTRTEKSKL SKGMVEKLTK KTGFNELESH ALGVAY

Type	Start	End	Confidence
Signal Peptide	1	29	0.61
N-region	1	20
H-region	21	26
C-region	27	29
Cleavage Site	29	30
Non-Cytoplasmic	30	356	0.98