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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|39589235, gi|...
Protein type: Transmembrane
Type Confidence: 0.89
Topology Confidence: 0.28
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MINIYLAIIT AVVGVLSYYL WTWTYWRRRG ISGPPGYPLI GCALEMLDSE NPPYLQLKEW  60
   61 TKEYGKVYGI TEGMMKILVI SDPALVEEVF VKQYDNFYGR KLYPIQGDPN KDKLVNLFAS 120
  121 QGHRWKRLRT ISSPTFSNNS LRKLKTTVED CALELLRHIE TQTAGGKPID LLTFYQEFTL 180
  181 DVIGRIAMGQ TDSQMFQNPM LKYVKAVFGE PRKFIFLSGA IVPWTGPLLR KFFMSLPNIF 240
  241 KNPAIHIIRQ VAQAVENRIA QRATDEKAGI EPGEPQDFID LFLDAKSDDV EIENNEDFTK 300
  301 AGIKVTRQLT KDEIVGQCFV FLIAGFDTTA LSLSYSSFLL ATHPEVQKKL QEEIDRECPD 360
  361 PEITFDQLSK LKYLECVVKE TLRKYPLGAM ANARRCMRST KIGNYEIEEG IDILCDTWTL 420
  421 HADKNIWGED AKEFKPERWE SGDEQFFQKG GYIPFGLGPR QCIGMRLAYM EEKLLLCHIL 480
  481 RKYTLETCSK TQIPLKLIGS RTTSPETVWL NLKPREDI

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle