YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|39589111, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.98
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLARSALFVH SAELAANAAR AASALKTPIL SIFPVFHRFS KIARAAAAQP KKTGNRIKTF  60
   61 EIYRFNPEAP GAKPTIQKFD VDLDQCGTMI LDALIKIKNE VDPTLTFRRS CREGICGSCA 120
  121 MNIGGENTLA CICKIDADTS KSTKIYPLPH MFVVKDLVPD MNLFYAQYAS IQPWIQKKTP 180
  181 LTLGEKQMHQ SVAERDRLDG LYECILCACC STSCPSYWWN ADKYLGPAVL MQAYRWVIDS 240
  241 RDDYAQERLH RMHDSFSAFK CHTIMNCTKT CPKHLNPAKA IGEIKSLLTG FKSKPAAEPS 300
  301 AF

Type	Start	End	Confidence
Signal Peptide	1	21	0.95
N-region	1	12
H-region	13	18
C-region	19	21
Cleavage Site	21	22
Non-Cytoplasmic	22	302	0.99