YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|187026866, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.55
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVCCCPVTTA LVVGAIAFFL YKKFFTPPTI KPKPAIHKTD YKKDVVYLYQ FKRLQNCPNL  60
   61 SPFCMKLEVL CRVNKIQYEI VESSFARSRN GTLPFIELNG EHIADSDLIE LRLRQHFKIS 120
  121 SLPTDQEAQS VALSRMADNH LFYILIRYKS SVDAFYETIV GLLNLPTALT ALLVPLVRAV 180
  181 FGSKLYARSV GAIGDFEPKE LDELLHRDLK VIQDSIKGKF LFGDKITPAD ATVFGQLASV 240
  241 YYPFRTHISD VLEKDFPKVL EYCERIRKEV YPNDFTI

Type	Start	End	Confidence
Signal Peptide	1	17	0.59
N-region	1	8
H-region	9	14
C-region	15	17
Cleavage Site	17	18
Non-Cytoplasmic	18	277	0.92