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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|39588527
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.66
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPPTCPNDFK SQLNSPETVR LLSYIKDSIV LPLHLFGAYC ILKKTPNNMH SIKFTLFNFH  60
   61 FWNVMFDLTY VFSIPIPIFP MPAGVMNGIL TKWGVPSTIQ LLLMVTAVSY VSVSTLMIFE 120
  121 NRFYLLNSKK KWWKRIRLFW MASNFLFGIL YQIPVILEVP DPKYAKEVVI NSLPCVPEFL 180
  181 YTADIVLPSL NDTTVILCTV IYVLVIFGQL FVFATIIMVQ LSTNFGASTL SGTTRRLQKR 240
  241 LLKALIWQTG IPFLYLVLPG CYSVFSVYTE YFNITLNNLV ATVASLNGFV STLSIILIHQ 300
  301 PYRNTIYNLN WCKNIFNPKA KKKVSHLKNF ELKYLVFSKK SKIDDFWLSI TGAEMNWLKV 360
  361 KETQISKFKK LKIQMGILKN GFQDPVDRPD IVARVFKLKI EELKQDLFIK HIFGEVAAWI 420
  421 FVIEFQKRGL PHMHLLMILK NEWKPRTASE IDEIVSAELL DPEEDPELFD IISSVQMHRP 480
  481 CGIHNPDSSC MVGDACSKHF PKDFRERTSV ENDGFPMYRR RDDGRTISFK TKNSGVVKLD 540
  541 NRSVVPYNKY LSRKFRSHAN LEICGNVGAV KYLYKYLYKG TSRAAIHIYT DKNGVEHRTE 600
  601 NEVNSYLDGR YVCAPESLWH IFDFRMSDRS TPVMQLKVHL KNAQGVVYKE GEEKDAAERG 660
  661 QL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle