YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|157761241
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQAMLLALAL VPLASAFVLP EAAHPENRDV YTIPYNDALA RKQLLFAAGA AYGTQPQQCL  60
   61 NKVFTGATVR RVIQARCDVN PADKCLGYTA VSPNDKAIIV VFRGTNNNVQ LILEGLETVF 120
  121 EYHTPWAAGG VVSQYFNDGF LNIWNAGLKD DFNALAAKYP GYQVWITGHS LGGAMASLAA 180
  181 SYITYNKLYD ASKVQLVTYG QPRVGDAAYA KAVDRDVTNK FRVTHAHDPV PHLPQQNMQG 240
  241 FTHHKAEVFY KEAMTKYNIC DDVDESEFCS NGQVLPDTSI KDHLHYFNLD VSDLGYSNCA 300
  301 NVKV

Type	Start	End	Confidence
Signal Peptide	1	25	0.85
N-region	1	16
H-region	17	22
C-region	23	25
Cleavage Site	25	26
Non-Cytoplasmic	26	304	0.99