YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|157757423
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.76
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALPSDEGLR KRKDSLSDEF DSELDDNEMK AIVSDIEQDK IHEEAPDTRW IRFKTHLKEW  60
   61 GETASLHGIP HMAQAHTVIA VVVWSIIMII SAVAFVYMFY SILASYLAFN VVVQLNTGLD 120
  121 SEPFPSITFC NTNPYKLSEM TKVPELNALL TVYQASADGS LS

Type	Start	End	Confidence
Cytoplasmic	1	76	0.84
Transmembrane Helix	77	100	0.88
Non-Cytoplasmic	101	162	0.76