YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|157757263
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.81
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLSQWKLDY SYSSKSCRTS DSNFNPPGFY SSAATIQHTA DAERSADQHE HLARKRAWDT  60
   61 AMGPAKSLPM NMFMMYMAGG GVSIFPIMMV GMMLFRPLKA LFSVNSTFKP LESPATGAMI 120
  121 IHKLIFCLGN LGAIGLAIYK VHTMGLLPNT PSDWLEFIPQ PGRAQYSIID EVFI

Type	Start	End	Confidence
Cytoplasmic	1	71	0.85
Transmembrane Helix	72	95	0.89
Non-Cytoplasmic	96	118	0.78
Transmembrane Helix	119	139	0.90
Cytoplasmic	140	174	0.81