YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|187023734, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.97
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRVSLLLVFA ILGQQFQVTF TYFWNEAATT NQRPAPSPNG NTPSNLGCFM CTQLLSVTKH  60
   61 RVGLSENQLR NQLYEKCRVL PSVFKEQCFA FVETSLPEIY YSINYDLSSK DVCVRMNFCD 120
  121 EQNPFAVGGP LPPIESSTMF PEDDIEEIEI PTTTTRRRTT TTTTLPTTTT RATTTTTRSP 180
  181 PPSPPMVPER REERTDRIGH KNVLEIIIPP PLRPKYVSRN TIVETSREKV VEKEEVDEKR 240
  241 LTCSFCERML ENAKNYAVTS KTDITSFANT ACASLPKGRT SDQCYQMADK KIAELAKFVD 300
  301 QQVVDALWCA ELNRC

Type	Start	End	Confidence
Signal Peptide	1	21	0.89
N-region	1	12
H-region	13	18
C-region	19	21
Cleavage Site	21	22
Non-Cytoplasmic	22	315	0.99