YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|187023679, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.98
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKIIFSIFLL ITISSAVPLL DRPTRDVWTP IEILLYASKT VVNRDSWFCG STDLQMAASH  60
   61 GVIATSCNEK MPEINHCCAV HDSCYDNYYG FQKHCDWEFC NCLERAMTRT PRLPSTCTKI 120
  121 PTHAACHLVQ WFGDSSQKSQ KPKQDPIGFH PALNQTVIQE YNKLYKECAG FRKPITSCAY 180
  181 NHMVCTLEML PQERYNQEYT DCRDQLVNCI NESATFLEMR KSTVCAAQLD IALEAIKDDA 240
  241 RLSGMSADYF YVNTNTTAQD IQ

Type	Start	End	Confidence
Signal Peptide	1	16	0.98
N-region	1	7
H-region	8	13
C-region	14	16
Cleavage Site	16	17
Non-Cytoplasmic	17	262	0.99