YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|157770952
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.62
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIQLEEETIL TMAWLMIASA IVVFAALRFG LTAGYGRYTN TARLGISPRL AWFIQEAPSF  60
   61 FIPFYYLFNG TSNSGHYLTR VFLLHYFNRV FIFPLKIRST TVSPLYIMLS AIFFCCYNGF 120
  121 MQGYWNAFYQ PEEGALTARH YIGSLLFFYG MYINHKADRI LFNLRAPGET GYKIPEGWLY 180
  181 EHISCPNYFG EIVEWTGYAI MAWNLPALAF AIFTASNIGP RAISHHAWYK EKFPEYPPHR 240
  241 KALIPFLL

Type	Start	End	Confidence
Cytoplasmic	1	9	0.62
Transmembrane Helix	10	31	0.91
Non-Cytoplasmic	32	60	0.59
Transmembrane Helix	61	84	0.67
Cytoplasmic	85	101	0.64
Transmembrane Helix	102	121	0.92
Non-Cytoplasmic	122	198	0.62
Transmembrane Helix	199	219	0.78
Cytoplasmic	220	248	0.73