YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|39587908, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.69
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTLQWTIVAG VLYAEIAATF ILLLPWVRPT LWSKLFKSRL FTALSKHAHI YSMTFGFVLF  60
   61 ILFADGVRET MKYNELEDKM HRTAEADATY HMRLFRAQRN LYISGFSLLL WMVIQRIMTL 120
  121 LSRAAQLEAA GEAAMRQAEN ASKTARTLMN ATETSEEVSD LNKQIEKLKG ELKSVNTDRD 180
  181 TLKKQSEGLQ REFDRVSDLL ASSNSKGDKK KD

Type	Start	End	Confidence
Non-Cytoplasmic	1	6	0.69
Transmembrane Helix	7	27	0.93
Cytoplasmic	28	46	0.69
Transmembrane Helix	47	67	0.88
Non-Cytoplasmic	68	99	0.72
Transmembrane Helix	100	120	0.81
Cytoplasmic	121	212	0.72