YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|39587804, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.92
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LETGSLQRRL LIYGIAGILA AVGAWLVLAI AVDNVSILIE GGGMHLDNLV GHVASGYEKV  60
   61 EKVFKRNFAD GWEREGASIT VYHKDRVIVD LQGGYADKAS GRKWTPDTRT VVFSTTKAVG 120
  121 AVCVAILVDR GYISYDDKMS KIWPEFAQNG KENITIDWLM SHRAGLAALD MPISIEDAND 180
  181 FAKMSEVIAS QKPNWEPGTK SGYHAITYGW IVDQIVRRAD PQGRSVGRFF KEEVADVHGI 240
  241 DFHIGLPPSE EHTVSRLSMP STMHLFREIV HDPRVLIVLA VFNLRPPNSI ARKIAANPTW 300
  301 FKLEQDVNTF NNPTLHAMEQ VAALGITKSR DLARLFSLVQ QGKLFSKDLL EKFRVPQVQG 360
  361 IDEVVMTPLP KGHGFLYERH PMSGKKWLVG HPGYGGSTIM MDLDDGITIA YVSNGLKTGM 420
  421 GELTRTYRHL RDAVFECLEK QKNGASVFIE DAVQAVAA

Type	Start	End	Confidence
Cytoplasmic	1	9	0.97
Transmembrane Helix	10	32	0.92
Non-Cytoplasmic	33	458	0.96