YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|157757607
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MARLLLIIGC ATLAAFASCE SKSGEETPQY WRAILGDICQ LPSFPRATGD PTRYVECVRQ  60
   61 SSFAADRKDL GIWLLRECLP GYEFVASARR CKTVRSVNKQ QELCESANAT EYNFCPTASA 120
  121 MQFLVEEIRE APRQCACPNG EQNCVCPSPE ILEPISAAKK VRRSAQQQPL RFSQYPSCPC 180
  181 PQNQPACTCS TNNQQNEQIL VSISCCQQDV ATTQAPVQMQ PCQCTPTQIQ QNCQTTTTQQ 240
  241 QYCPQQSAPV VQPQPCPLVQ GSGVQNAQYQ GICSWMIDPL ATDPQSRTHF LQCQPAPNNL 300
  301 FCGRWQRMPC APGTVFDVSS QVCVWDTSSQ PGTLPTPAPY VSTQAPQNAQ CGCTGGVQIG 360
  361 SCNQNYQCPG QSVCQVGQNN GQQCMVCCYF RKKARRF

Type	Start	End	Confidence
Signal Peptide	1	19	0.97
N-region	1	10
H-region	11	16
C-region	17	19
Cleavage Site	19	20
Non-Cytoplasmic	20	397	0.99