YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|2947087
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.84
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSEPQNGRGA LFTGGLAAIL ASACCLGPLV LIALGFSGAW IGNLTVLEPY RPIFIGAALV  60
   61 ALFFAWRRIY RPAQACKPGE VCAIPQVRTT YKFIFWGVAA LVLVALGFPY VMPFFY

Type	Start	End	Confidence
Cytoplasmic	1	10	0.92
Transmembrane Helix	11	36	0.88
Non-Cytoplasmic	37	49	0.81
Transmembrane Helix	50	70	0.90
Cytoplasmic	71	90	0.96
Transmembrane Helix	91	112	0.92
Non-Cytoplasmic	113	116	0.84