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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|39587174, gi|...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.99
Topology Confidence: 0.91
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQRFTIGLGL CLLAASVSAI PVDNNVEGEP EIECGPTSIT VNFNTRNAFE GHVYVKGLFD  60
   61 QQECRNDEGG RQVAGIELPF DTCNVARTRS LNPKGVFVTT TVVVSFHPQF VTKVDRAYRI 120
  121 QCFYMEADKT VSTQIEVSDL TTAFQTQVVP MPICKYEILN GGPTGEPVQF ATIGQQVYHK 180
  181 WTCDSETVDT FCAVVHSCTV DDGNGDTVQI LDENGCALDK FLLNNLEYPT DLMAGQEAHV 240
  241 YKYADRSQLF YQCQISITVK EPHEECARPT CSEPQGFGAV KQANQTAQFF RVLKKRSVEA 300
  301 MENVLDVRAE LTTLEVLEGD LPASLRTSAE ALVASSEIGY DTFGQGFCVS YFAVSIASVF 360
  361 AGFTIFVAIF MTYMIVSRVP RSKNSDC

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle