YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|157750052
Protein type:	Globular with Signal Peptide
Type Confidence:	0.77
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKTVKLKICI PILLKLIFLI ENSNGAQYVG TSASQPNRTD VVWMVPSWPC VDNDSIDVQK  60
   61 FGILQNEDQE FVGGQEFAIF YEHSFGKVPY FKAQNVSDPQ NGGLPQLGDL QAHLEQAEID 120
  121 IKTTIPDENF SGIAVLDIEE FRPTWELSWG VFQVYKTESI RLTRQQYPYW SEKQIEWYAE 180
  181 KDYEKACQKF FIETIRLGKR LRPNAKWGYY LFPKCNGDVG QKQENECSTL FQKFNDNLIW 240
  241 LWAESTALFP SIYLYPTHKQ APDFNFINSG ALITETKRIK RNYCPGCEIH VFTKIEYNPY 300
  301 NTPDEFYSKQ NLASTIDLAI KMNVNSVVIW STSQSMRSRC GLLQTYLDNT LGPYLQLTDR 360
  361 NMEKCRQERC EGRGECYLPR PKTNPALYNF ACRCERPYFG KSCEYRGRRI GYSKSRPKPS 420
  421 QTRIPDVSAY FRPAAPSFSS ISESNRYNAP NQYYNKGSNV GNGQKIELIK

Type	Start	End	Confidence
Signal Peptide	1	25	0.77
N-region	1	16
H-region	17	22
C-region	23	25
Cleavage Site	25	26
Non-Cytoplasmic	26	470	0.99