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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|25453542, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.78
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDSSFFLVLV AAATGFFMLF RKFRFHQDNK ESNSSSLSRP TAATSVSRNW KHDVFPSFHG  60
   61 ADVRRTFLSH ILESFRRKGI DTFIDNNIER SKSIGPELKE AIKGSKIAIV LLSRKYASSS 120
  121 WCLDELAEIM KCREVLGQIV MTIFYEVEPT DIKKQTGEFG KAFTKTCRGK TKEHIERWRK 180
  181 ALEDVATIAG YHSHKWSNEA EMIEKISTDV SNMLDLSIPS KDFDDFVGMA AHMERTEQLL 240
  241 RLDLDEARMI GIWGPPGIGK TTIARFLFNQ VSDRFQLSAI MVNIKGCYPR PCFDEYSAQL 300
  301 QLQNQMLSQM INHKDIMISH LGVAQERLRD KKVFLVLDEV DQLGQLDALA KDTRWFGPGS 360
  361 RIIITTEDQG ILKAHGINHV YKVEYPSNDE AFQIFCMNAF GQKQPYEGFC DLAWEVKALA 420
  421 GELPLGLKVL GSALRGMSKP EWERTLPRLR TSLDGKIGGI IQFSYDALCD EDKYLFLYIA 480
  481 CLFNNESTTK VEEVLANKFL DVGQGIHVLA QKSLISFEGE EIQMHTLLEQ FGRETSRKQF 540
  541 VHHRYTKHQL LVGERDICEV LNDDTIDSRR FIGIHLDLSK NEEELNISEK ALERIHDFQF 600
  601 VRINDKNHAL HERLQDLICH SPKIRSLKWY SYQNICLPST FNPEFLVELD MSFSKLQKLW 660
  661 EGTKQLRNLK WMDLSYSSYL KELPNLSTAT NLEELNLRNC SSLVELPSSI EKLTSLQILD 720
  721 LQGCSSLVEL PSFGNATKLE ILYLDYCRSL EKLPPSINAN NLQKLSLRNC SRIVELPAIE 780
  781 NATNLWELNL LNCSSLIELP LSIGTARNLF LKELNISGCS SLVKLPSSIG DMTNLKEFDL 840
  841 SNCSNLVELP SSIGNLQNLC KLIMRGCSKL EALPININLK SLDTLNLTDC SQLKSFPEIS 900
  901 THIKYLRLTG TAIKEVPLSI MSWSPLAEFQ ISYFESLKEF PHAFDIITEL QLSKDIQEVT 960
  961 PWVKRMSRLR YFRLNNCNNL VSLPQLPDSL AYLYADNCKS LEKLDCCFNN PWISLHFPKC1020
 1021 FKLNQEARDL IMHTSTSRIA MLPGTQVPAC FNHRATSGDY LKIKLKESPL PTTLRFKACI1080
 1081 MLVMVNEGIS YDRKIKLSVD IRDEQNDLKV QCTPSGCYIY PLTEHIYTFE LEVEEVTSTE1140
 1141 LVFEFTLDKE SNWKIGECGI LQRETRSLRR SSSPDLPSES SRVSSYNHC

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle