YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|187033636, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.91
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLLPIALIFP LISLVSTDFS PHFRKFLHDS YGIAITDMLE RTDLGMDASF GGKDSSADVP  60
   61 RNQAVIIVHG ITNKASRFAG TVAFLKSKGY KNAEIYGTTW GDGGRMPVGL VEMKCNYVKQ 120
  121 IRAIIIAVRE YTGQPVDVIG YSMGAPLARK AILGGQCVDT REILGAPLTE LVDTFLSVAG 180
  181 ANYGSVLCIV PVPVGTCNKR NGLHCDSEFL QDINNQQRYE GSYTFSIFST ADEKIGFRSC 240
  241 GRPVSPIRGG TGFVKRDGLN HDQLMDSTHP LQRNFILYHS PKAPKQRLL

Type	Start	End	Confidence
Signal Peptide	1	17	0.92
N-region	1	8
H-region	9	14
C-region	15	17
Cleavage Site	17	18
Non-Cytoplasmic	18	289	0.99