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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|39586886, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.58
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MREFLFLLFI VSPVSGKPQK DPRGPNIIDE TADFGTPEHD NRVHTELTEL TGPEIARLIG  60
   61 SDYFNGSVLP CDNETAPGQW MVYCSGRLLQ AVMAVKLYPD SKTFVDQPMK VNRTGESIME 120
  121 HFEKRFPKPI EEISKKEVAE FVDEFFDKEG NELDVCELPD WKPITEKLAQ IKDDTYLAFA 180
  181 QRLHFIWIQL CRQMKPEVKE DPSRFSLIYV PYQFILPGGR FREFYYWDAY WIVKGLIASE 240
  241 LYSTARMMIL NFAHIIETYG FIPNGGRVYY LRRSQPPFFA PMVYEYYLAT QDTQLVMDMI 300
  301 PVIEKEYIFW SQRRSVNITL ETQEFNETVR MFQYHTEADT PRPESFREDV LSAEPFTTKS 360
  361 KKRSFFKDIG SAAESGWDFS SRWFKDHKNL TTIETTNIVP VDLNAFLCYN MNIMQFFYQL 420
  421 AGNPLKHMEW SSRLANFRQD FTKVFYVPVR KGWYDYNLRT GSHNTDFFPS NAAPLFAQCY 480
  481 DPLNSQLAVD VYNQMENSGA FSMSGGIPTS MHKETNQQWD YPNGWSPLNH MIIEGLRKSL 540
  541 NPTLQQKAFV LAQKWLETNM QTFNVSNAMW EKYNVQEPQG KLATGGEYEV QAGFGWTNGA 600
  601 ALDLIMTYSD RLEYKGPLLE GLVGTPPPHK SSSSSSSSSS SSTSESSSTV IPSSTTGSSS 660
  661 KLLAIITVTI FYFLF

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle