YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	QPCT_ARATH
Protein type:	Globular with Signal Peptide
Type Confidence:	0.55
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATRSPYKRQ TKRSMIQSLP ASSSASSRRR FISRKRFAMM IPLALLSGAV FLFFMPFNSW  60
   61 GQSSGSSLDL SHRINEIEVV AEFPHDPDAF TQGLLYAGND TLFESTGLYG KSSVRKVDLR 120
  121 TGKVEILEKM DNTYFGEGLT LLGERLFQVA WLTNTGFTYD LRNLSKVKPF KHHMKDGWGL 180
  181 ATDGKALFGS DGTSTLYRMD PQTMKVTDKH IVRYNGREVR YLNELEYINN EVWANVWQSD 240
  241 CIARISPKDG SLLGWILLSK LSRGLLKSGH RGIDVLNGIA WDSDKQRLFV TGKLWPKLYQ 300
  301 IKLKQASAKS GNYIEQQCLV

Type	Start	End	Confidence
Signal Peptide	1	61	0.55
N-region	1	52
H-region	53	58
C-region	59	61
Cleavage Site	61	62
Non-Cytoplasmic	62	320	0.99