YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|187022766, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.94
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYHLFILLML TTNIVFSEKC ESNEECDSKW PDAICVRGRC RCPENTIRKK SASREWVCLA  60
   61 TNDAKFFLTS PFSIKVGNSG PPLTCPTPEG AGYQVMYRKD GEPVKCSSKK KPDSCPEGFE 120
  121 CIQGLSILGA LDGVCCPDRA KTCDHPIFDH PDDGYLSRWG FDGVSCIEFK WNPERPSSAN 180
  181 NFKTRAHCED YCIGSSINGL SNYQQTNFHL

Type	Start	End	Confidence
Signal Peptide	1	17	0.94
N-region	1	8
H-region	9	14
C-region	15	17
Cleavage Site	17	18
Non-Cytoplasmic	18	210	0.99