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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|157776612
Protein type: Transmembrane
Type Confidence: 0.97
Topology Confidence: 0.44
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNTYVAEIGE IVRAQRRDEE YVDEISEKFS KVFKELLGQR RWIRWYPYLK TIASSLYYSS  60
   61 TVVVGNQTLG EEYVHLFESD GLQRVVPSIP SRVSFVLLHS VFPLISNFLI QKAEATLTHP 120
  121 STNRFLGIDI RSNRKARQSF LDVFHWLRTV LFPQLQRAHC ALFYITGSYY SIARRATRIR 180
  181 FLSASAQSDI PALKVYRFLG FVTLAQLAIS ALLAIFSWLE TEKSQKNLEK SKDQKLGKGL 240
  241 ESSDLDAISL SHPTFQCTIC LENRNPSALF CGHLFCWQCI QEHATTYSGS TSSARCPSCR 300
  301 LEFQPRDSSL CQYSSPNHHP TIYFTGIQPT GIPHLGNFFG SIEPWIDLQN SVNPEDQMML 360
  361 SVVDQHAISL GPLPADQLRR NTRQMTASVI ACGVDPSRTL LFRQSDIPQI AQLSWILGSL 420
  421 QTTSKLARLP QYKEKQERFK KGDIPVGLLT YPLLQAADVL TFKATTVPVG EDQSQHLNLL 480
  481 GGLAYAFNKT YQTDIFPIPK QLTREKNARI RSLREPEKKM SKSSGGPRSR IEITDSRETI 540
  541 IEKCQKAQSD TAGAVTYDKK NRLAVSNLLD LYSAITKTPL SEIDYSSWST LDLKMNLAEK 600
  601 IDNRLEPIRE KFEELENSEE IDKILERNGD AAREIAEKNL KEIRRIVGFL 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle